WebGBrowse 2.1 – A Web Server Supporting Multiple Versions of the Generic Genome Browser for Customizable Genome Annotation Display

Name: WebGBrowse 2.1 - A Web Server Supporting Multiple Versions of the Generic Genome Browser for Customizable Genome Annotation Display
SKU: 52480
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Ram Podicheti, V. Kashi Revanna and Qunfeng Dong
Indiana University, Bloomington, Indiana, USA, and others

Series: Computer Science, Technology and Applications
BISAC: COM014000

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Volume 10

Issue 1

Issue 2

Issue 3

Issue 1

EDITORIAL Disability prevention: A focus on “falls” as a precipitating factor for eventual disability Sudip Bhattacharya and Amarjeet Singh

REVIEW RESEARCH Tobacco smoke exposure and household pets: A systematic literature review examining the health risk to household pets and new indications of exposed pets affecting human health Kevin Puzycki, Utku Ekin, Satesh Bidaisee, and Emmanuel Keku

REVIEW RESEARCH Schistosomiasis: The bad worm Richard R Roach

Food additives: An overview of health implications and regulation and control in the United States Sharmeen Samuel, Kelly Brown, and Dilip R Patel

ORIGINAL RESEARCH Reliability and validity of the Chinese version of the psycho-educational profile (third edition) performance test Daniel TL Shek and Lu Yu

ORIGINAL RESEARCH Student development under a new general education program in Hong Kong: A 3-Year longitudinal assessment Daniel TL Shek, Lu Yu, and Xiaoqin Zhu

ORIGINAL RESEARCH Subjective outcome evaluation of the Tin Ka Ping P.A.T.H.S. Project in China: View of the students Daniel TL Shek, Tak Yan Lee, and Lawrence K Ma

ORIGINAL RESEARCH Evaluation of the Project P.A.T.H.S. in Mainland China: Views of the program implementers in senior high schools Daniel TL Shek, Florence KY Wu, and Mengtong Chen

ORIGINAL RESEARCH Evaluation of the training program of a positive youth development program: Tin Ka Ping P.A.T.H.S. Project in China Daniel TL Shek, Janet TY Leung, Mengtong Chen, and Chi Kin Chung

ORIGINAL RESEARCH Anti-doping knowledge of junior international racquetball athletes Timothy Baghurst

ORIGINAL RESEARCH Homeopathic potencies maintain their difference from each other and the aqueous ethanol control at different dilutions with water Atheni Konar, Tandra Sarkar, Nirmal C Sukul, Pallab Datta, Ashoke Sutradhar, and Anirban Sukul

ORIGINAL RESEARCH Mozambique: A model for health care distribution and resource allocation Amina Merchant, Camila Walters, Julie Valenzuela, Kelly McQueen, and Joao Schwalbach

Volume 2

EDITORIAL Neighbors: Keep a good relationship Joav Merrick

REVIEW RESEARCH The whey and casein protein powder consumption: The implications for public health Aisha Bowen, Vanessa C Denny, Iman Zahedi, Satesh Bidaisee, and Emmanuel Keku

Community medicine: Bridging the gap between veterinary and allopathic medicine using the one-health-one-medicine concept Iman Zahedi, Vanessa Denny, Aisha Bowen, Emmanuel Keku, and Satesh Bidaisee

Families in transition in Hong Kong: Implications to family research and practice Janet TY Leung and Daniel TL Shek

SHIP®: A successful TSM (trauma-spectrum manifestation) healing modality for Meige syndrome Johan O Steenkamp

ORIGINAL RESEARCH Women’s diagnosis of HIV/AIDS status and its relationship to intimate partner violence Yasoda Sharma and Vijayan Pillai

The protection motivation theory and its impact on prostate cancer screening in Guyana Naomi N Modeste, Malcolm Cort, and Janice E McLean

Dementia awareness for high school students: A pilot program Selina Chow, Ronald Chow, Clarissa Yu, Olivia Nadalini, Daniela Krcmar, Carlo DeAngelis, and Nathan Herrmann

Caregiver reports on the socio-economic and safety issues associated with Sakkiya treatment: A survey of a neglected area in Nigerian healthcare Kehinde K Kanmodi, Olanrewaju I Owoeye, and Godwin O Ndubuizu

Are caregivers doing enough on Sakkiya education? Evidence from a hospital survey Kehinde K Kanmodi, Olanrewaju I Owoeye, and Godwin U Ndubuizu

Prevalence of shisha (waterpipe) smoking and awareness of head and neck cancer among Nigerian secondary school students: A preliminary survey Kehinde K Kanmodi, Omotayo F Fagbule, and Timothy O Aladelusi

After medical school; what next? A survey on graduating medical students’ choice of a postgraduate study program Kehinde K Kanmodi, Abass A Moshood, and Ismail O Adesina

Healthcare provider attitude towards persons with disabilities in Nigeria Paul M Ajuwon, Ishiaq O Omotosho, and Rebecca Y Stallings

Volume 3

Special issue: Resilience in breaking the cycle of children’s environmental health disparities
Edited by I Leslie Rubin, Robert J Geller, Abby Mutic, Benjamin A Gitterman, Nathan Mutic, Wayne Garfinkel, Claire D Coles, Kurt Martinuzzi, and Joav Merrick

EDITORIAL Break the cycle of children’s environmental health disparities: Review of the 12th annual program and student projects I Leslie Rubin, Robert J Geller, Abby Mutic, Benjamin A Gitterman, Nathan Mutic, Wayne Garfinkel, Claire D Coles, Kurt Martinuzzi, and Joav Merrick

REVIEW RESEARCH Resilience: A commentary on breaking the cycle I Leslie Rubin

ORIGINAL RESEARCH Factors associated with maternal drug use and the severity of neonatal abstinence syndrome Pratibha Agarwal, Beth Bailey, Jesi Hall, Michael Devoe, and David Wood

Mothers in prison: The effects of incarceration on children’s behavioral health outcomes Tatenda Mangurenje and Melvin J Konner

Impact of housing instability on child behavior at age 7 years Abigail L Gaylord, Whitney J Cowell, Lori A Hoepner, Frederica P Perera, Virginia A Rauh, and Julie B Herbstman

Recent DDT exposure, socio-economic status and neurodevelopmental outcomes in children of selected communities in Zambia Nosiku S Munyinda, Sandra Shanungu, Given Moonga, and Charles C Michelo

Racial disparities in access to municipal water supplies in the American south: Impacts on children’s health Frank Stillo and Jacqueline MacDonald Gibson

A silver lining for neonatal intensive care (NICU) graduates: Coordinated services from 0-6 years Lea Redd, Ren Belcher, Brianne Dotts, and Bree Andrews

Exploring the role of social support in understanding barriers to breastfeeding practices for adolescent pothers in Western North Carolina: A preliminary study Colleen Clark, and Kimberly Price

A community-based program to decrease the risk of childhood obesity Hope Bentley, Jannett Lewis-Clark, Alfonso Robinson Jr, Brittany McCullough, Vanessa Harris, Kayla Bryan, Precious Harris, Teralesha Baity, and Chante’ Warner

Lead education program with the Boys and Girls Club of Metro Atlanta Amrita G Mahtani, Catherine G Evans, Samuel JW Peters, Patrick O Fueta, and William M Caudle

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ISBN: N/A Categories: Computer Science, Technology and Applications, Computer Science, Computer Science and Internet Tags: 9781611228731, computer science

Details

Genome browsers are critical bioinformatics tools for biologists to visualize genome annotations and the other sequence features along a reference sequence. GBrowse is one of the most popular genome browsers used by the research community. However, its installation and configuration prove to be difficult for many biologists. We have developed a web server, WebGBrowse, which takes a user-supplied annotation file in GFF3 format, guides users through the configuration of the display of each genomic feature, and allows them to visualize the genome annotation information via the GBrowse software. This book describes an upgraded WebGBrowse server, WebGBrowse 2.0, which provides users with a choice to display their genome annotation with different versions of the GBrowse software. (Imprint: Nova)

ABSTRACT

INTRODUCTION

MATERIALS AND METHODS

NOTES

DISCUSSION

FUTURE WORK

AVAILABILITY

CONCLUSION

ACKNOWLEDGEMENTS

REFERENCES

INDEX

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