Protein – Water Interactions: A Differential Approach

Vladimir A. Sirotkin (Editor)
A. M. Butlerov Institute of Chemistry, Kazan Federal University, Kazan, Russia

Series: Protein Biochemistry, Synthesis, Structure and Cellular Functions

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This book is aimed at understanding which molecular parameters control the thermodynamics, structure, and functions of the protein-water systems. Proteins are one of the most important classes of biological molecules. Water binding (hydration or biological water) plays a crucial role in determining the structure, stability, and functions of proteins. Knowledge of processes occurring upon hydration or dehydration of protein macromolecules is very important in biotechnological and pharmaceutical applications of proteins such as their use as biocatalysts, biosensors, and selective adsorbents.

There are essential differences between hydration and bulk water surrounding a protein. This means that a characterization of the hydration of protein macromolecules requires elucidating the effects of both the protein on water and vice versa. Therefore, a quantitative estimation of the protein and water contributions to the thermodynamic functions of binary protein-water systems is of considerable fundamental importance and practical interest.

This book describes the basic principles of a novel methodology to investigate the protein-water interactions. This methodology is based on the analysis of the excess thermodynamic functions of mixing. The thermodynamic properties (volume V, enthalpy H, entropy S, heat capacity Cp, and Gibbs free energy G) of a real binary water-protein system can be expressed in terms of the excess functions.

They are the difference between the thermodynamic function of mixing in a real system and the value corresponding to an ideal system at the same temperature, pressure and composition. For an ideal system, all excess functions are zero. Deviations of the excess functions from zero indicate the extent to which the studied binary system is non-ideal due to strong specific interactions between components (i.e., hydrogen bonding and charge-charge interactions).

The advantages of our methodology are:
i) We are able to simultaneously determine the excess partial quantities of water and proteins;
ii) These thermodynamic quantities can be determined in the entire range of water content.

In the present book, high-precision densitometry, differential scanning calorimetry, and isothermal calorimetry were applied to characterize the hydration dependencies of the excess thermodynamic functions of binary protein-water systems.

Ovalbumin, ribonuclease A, lysozyme, chymotrypsinogen A, serum albumin, lactoglobulin were used as model proteins. These biomacromolecules represent a series of proteins in which the hydrophobicity of proteins is gradually changed in a wide range.

Chapters 1-5 describe the excess thermodynamic functions of the binary systems obtained as a function of composition at 25 oC. The aim of these studies is to demonstrate how these thermodynamic quantities correlate with the coverage of the protein macromolecules by water molecules.

Chapters 6 and 7 present the analysis of the hydration and structure of proteins in the presence of organic solvents by isothermal calorimetry and FTIR spectroscopy. (Imprint: Novinka)

Preface

Chapter 1 - Analysis of Hydration of Binary Protein-Water Mixtures. Methodology (pp. 1-14)
Vladimir A. Sirotkin (Kazan Federal University, Kazan, Russia)

Chapter 2 - A Study of the Excess Gibbs Energy of Ribonuclease A - Water Mixtures (pp. 15-32)
Vladimir A. Sirotkin and Aigul V. Khadiullina (Kazan Federal University, Kazan, Russia)

Chapter 3 - Analysis of Hydration of Ovalbumin by Densitometry (pp. 33-50)
Vladimir A. Sirotkin and Aigul V. Khadiullina (Kazan Federal University, Kazan, Russia)

Chapter 4 - Analysis of Hydration of Ovalbumin by Isothermal Calorimetry (pp. 51-70)
Vladimir A. Sirotkin, and Aigul V. Khadiullina (Kazan Federal University, Kazan, Russia)

Chapter 5 - A Study of the Heat Capacity of Ribonuclease A – Water Mixtures (pp. 71-86)
Vladimir A. Sirotkin (Kazan Federal University, Kazan, Russia)

Chapter 6 - Effect of Water Solvation on the Heat Effects of Dehydration of Alpha-Chymotrypsin in Organic Solvents (pp. 87-106)
Vladimir A. Sirotkin and Elena V. Dudkina (Kazan Federal University, Kazan, Russia)

Chapter 7 - Analysis of the Organic Solvent Effect on the Hydration and Structure of Alpha-Chymotrypsin (pp. 107-124)
Vladimir A. Sirotkin (Kazan Federal University, Kazan, Russia)

Index

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